Curriculum Vitae

Berdakh Abibullaev, Ph.D.

Machine Learning Researcher · Neural Signals · Time-Series · Robust AI

✉ berdakho@gmail.com 🌐 berdakh.github.io 🔗 Google Scholar · GitHub · LinkedIn


Professional Summary

Machine learning researcher with 10+ years of experience in neural signal processing, brain-computer interfaces, and deep learning for non-stationary temporal data. Research focused on invariant representation learning — developing AI systems that generalize reliably under distribution shift, subject variability, and real-world deployment constraints. Insights from neural and physiological signals transfer directly to medical monitoring, wearable devices, and industrial time-series systems.

Track record includes competitive grant funding as PI and Co-PI, supervision of PhD, MSc, and undergraduate researchers, nearly a decade of undergraduate teaching at the Associate Professor level, and peer-reviewed publications in IEEE Transactions on Human-Machine Systems, IEEE Journal of Biomedical and Health Informatics, and IEEE Access.

Full research vision → Research Statement Teaching philosophy → Teaching Statement


Academic & Research Appointments

PositionInstitutionLocationPeriod
Associate ProfessorNazarbayev University, School of Engineering and Digital SciencesAstana, Kazakhstan2022–present
Assistant ProfessorNazarbayev University, Robotics & Mechatronics DepartmentAstana, Kazakhstan2015–2021
Visiting ProfessorUniversity of Houston, Dept. of Electrical & Computer EngineeringHouston, TX2018
NIH Postdoctoral FellowUniversity of HoustonHouston, TX2014–2015
Research ProfessorSamsung Medical Center & Sungkyunkwan UniversitySeoul, South Korea2013–2014
Senior Research ScientistDGIST, Robotics Research DivisionDaegu, South Korea2012–2013
Postdoctoral FellowDGISTDaegu, South Korea2010–2012

Education

DegreeInstitutionLocationYears
Ph.D., Electronic & Computer EngineeringYeungnam UniversitySouth Korea2006–2010
M.S., Electronic EngineeringYeungnam UniversitySouth Korea2004–2006
B.S., Telecommunication EngineeringTashkent University of Information TechnologiesUzbekistan2000–2004

Research & Technical Expertise

Machine Learning & AI

Deep learning (CNNs, Transformers, hybrid architectures), representation learning for time-series data, domain adaptation and subject-independent modeling, self-supervised and multimodal learning, model calibration and uncertainty quantification, temporal sequence modeling for long physiological recordings.

Programming & Frameworks

PyTorch, TensorFlow, scikit-learn, MNE-Python, Python, MATLAB, C/C++

Research Infrastructure

Reproducible ML pipelines, Git, Docker, HPC, cloud computing environments.

Application Domains

Clinical EEG & intracranial EEG, brain-computer interfaces, biomedical signal processing, multimodal physiological data.


Teaching

Designed and delivered undergraduate and graduate courses integrating mathematical foundations with hands-on implementation. Average teaching evaluations: 4.5 / 5.0.

Courses taught: Signals and Systems · Microcontrollers with Laboratory · Digital Logic Circuit Design · Machine Learning with Applications (PyTorch-based) · Brain-Machine Interfaces (Graduate Seminar) · Neural Signal Processing · Deep Learning

Students I have mentored have appeared as co-authors on peer-reviewed publications, including work in IEEE Access and IEEE Transactions on Human-Machine Systems. I view research co-authorship as a natural extension of the teaching mission and one of the most effective ways to develop scientific thinking in early-career students.

Full teaching philosophy → Teaching Statement


Grants & Funding

Principal Investigator or Co-Principal Investigator on competitive research grants totaling over $1.1M, including NIH-funded work on EEG-based motor decoding for stroke rehabilitation (University of Houston, with Prof. Jose Luis Contreras-Vidal).


Patents

2 granted patents in neural signal processing and brain-computer interface technology.


Selected Publications

For the complete list, see Publications and Google Scholar.

  • 2023: Abibullaev, B., Keutayeva, A., & Zollanvari, A. Deep Learning in BCIs: A Comprehensive Review of Transformer Models, Advantages, Challenges, and Applications. IEEE Access. [Link]

  • 2022: Abibullaev, B., Kunanbayev, K., & Zollanvari, A. Subject-Independent Classification of P300 Event-Related Potentials Using a Small Number of Training Subjects. IEEE Transactions on Human-Machine Systems. [Link]

  • 2021: Abibullaev, B. & Zollanvari, A. A Systematic Deep Learning Model Selection for P300-Based Brain-Computer Interfaces. IEEE Transactions on Systems, Man, and Cybernetics: Systems. [Link]

  • 2019: Abibullaev, B. & Zollanvari, A. Learning Discriminative Spatiospectral Features of ERPs for Accurate Brain-Computer Interfaces. IEEE Journal of Biomedical and Health Informatics. [Link]


Academic Service & Leadership

Established and led a Brain-Computer Interface research laboratory at Nazarbayev University. Supervised doctoral, master’s, and undergraduate researchers. Reviewer for international journals and conferences in machine learning and biomedical engineering. IEEE Senior Member.